| Title of Article |
TSD: a database of sugarcane biological data collectionand web-based computer software tools |
| Date of Acceptance |
23 July 2012 |
| Journal |
| Title of Journal |
KHON KAEN AGRICULTURE JOURNAL (KAEN KASET) |
| Standard |
TCI |
| Institute of Journal |
Faculty of Agriculture, Khon Kaen University |
| ISBN/ISSN |
01250485 |
| Volume |
40 |
| Issue |
3 |
| Month |
- |
| Year of Publication |
2016 |
| Page |
208-213 |
| Abstract |
Sugarcane is an economic important crop of Thailand. Physiology, genetics and molecular biology of sugarcane are of our interest. A wealth of data has been produced by both computational-based and chemical reagent-based experimental works such as EST-derived SSR markers, EST-derived SNP markers, protein markers identified by 2D-gel and LC-MS. These diverse data would be integrated to describe the meaningful relationships in biological processes of sugarcane. To achieve this goal, a bioinformatic system for sugarcane biology database has been established namely Thai sugarcane database (TSD). A section of TSD database collecting EST-derived SSR markers and EST-derived SNP markers is presented in this article. Another feature, web-based application is equipped with TSD database allowing querying of TSD database and several links. This feature guarantees a high integration with other public database such as GenBank. Bioinformatic system combining the database and web-based applications are therefore valuable tool for the analysis of the increasing quantities of biological data resulting from chemical reagent laboratory works of our group. It will also guide us to design future computational-based and chemical reagent-based experimental works and gain more in-depth knowledge of sugarcane biology. |
| Keyword |
Sugarcane, Expressed Sequence Tags (ESTs), Bioinformatics and Database |
| Author |
|
| Reviewing Status |
มีผู้ประเมินอิสระ |
| Status |
ตีพิมพ์แล้ว |
| Level of Publication |
ชาติ |
| citation |
false |
| Part of thesis |
true |
| ใช้สำหรับสำเร็จการศึกษา |
ไม่เป็น |
| Attach file |
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| Citation |
0
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